Finding the unloaded geometry

Finding the unloaded geometryΒΆ

from fenics_plotly import plot
import pulse
geometry = pulse.HeartGeometry.from_file(pulse.mesh_paths["simple_ellipsoid"])
# geometry = pulse.geometries.prolate_ellipsoid_geometry(mesh_size_factor=3.0)
material = pulse.NeoHookean()
# material = pulse.Guccione()
2022-06-05 11:55:41,608 [694] INFO     pulse.geometry_utils: 
Load mesh from h5
# Parameter for the cardiac boundary conditions
bcs_parameters = pulse.MechanicsProblem.default_bcs_parameters()
bcs_parameters["base_spring"] = 1.0
bcs_parameters["base_bc"] = "fix_x"
# Create the problem
problem = pulse.MechanicsProblem(geometry, material, bcs_parameters=bcs_parameters)
# Suppose geometry is loaded with a pressure of 1 kPa
# and create the unloader
unloader = pulse.FixedPointUnloader(problem=problem, pressure=3.0)
2022-06-05 11:55:41,786 [694] INFO     pulse.unloader: 

-------------------------- Unloading options ---------------------------

	Target pressure: 3.0
	maxiter = 10
	tolerance = 0.0001
	regenerate_fibers (serial only)= False

------------------------------------------------------------------------
# Unload the geometry
unloader.unload()
2022-06-05 11:55:41,794 [694] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-05 11:55:41,796 [694] INFO     pulse.unloader: ----------------------------Start unloading-----------------------------
2022-06-05 11:55:41,798 [694] INFO     pulse.unloader: ------------------------------------------------------------------------
2022-06-05 11:55:41,803 [694] INFO     pulse.unloader: 
LV Volume of original geometry = 0.749 ml
2022-06-05 11:55:41,873 [694] INFO     pulse.unloader: 
Do an intial solve
2022-06-05 11:57:41,953 [694] INFO     pulse.unloader: 
Iteration: 0
2022-06-05 11:57:48,164 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-05 11:57:48,222 [694] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-05 11:57:55,412 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:55,418 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/quadrature/quadraturerepresentation.py:58: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
  Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-05 11:57:55,481 [694] WARNING  FFC:   Ignoring precision in integral metadata compiled using quadrature representation. Not implemented.
2022-06-05 11:57:56,100 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:56,170 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:56,171 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:56,236 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:56,238 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:57:56,296 [694] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.568 ml
2022-06-05 11:59:55,523 [694] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.568 ml
2022-06-05 11:59:55,769 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,770 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,844 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,845 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,917 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,919 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:55,984 [694] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.717 ml
2022-06-05 11:59:56,010 [694] INFO     pulse.unloader: 
Residual:	0.01132862342853829
2022-06-05 11:59:56,010 [694] INFO     pulse.unloader: 
Iteration: 1
2022-06-05 11:59:56,262 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,263 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,335 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,337 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,405 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,407 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 11:59:56,471 [694] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.596 ml
2022-06-05 12:00:03,182 [694] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.596 ml
2022-06-05 12:00:03,423 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,425 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,497 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,499 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,572 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,574 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,637 [694] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.754 ml
2022-06-05 12:00:03,662 [694] INFO     pulse.unloader: 
Residual:	0.001698010214540525
2022-06-05 12:00:03,663 [694] INFO     pulse.unloader: 
Iteration: 2
2022-06-05 12:00:03,920 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,922 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,990 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:03,992 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:04,062 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:04,063 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:04,126 [694] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.592 ml
2022-06-05 12:00:10,953 [694] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.592 ml
2022-06-05 12:00:11,202 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,203 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,271 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,273 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,341 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,343 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,404 [694] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.749 ml
2022-06-05 12:00:11,428 [694] INFO     pulse.unloader: 
Residual:	0.00025928769312982787
2022-06-05 12:00:11,429 [694] INFO     pulse.unloader: 
Iteration: 3
2022-06-05 12:00:11,677 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,678 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,744 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,745 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,804 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,806 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:11,868 [694] INFO     pulse.unloading_utils: 
LV Volume of original geometry = 0.593 ml
2022-06-05 12:00:18,559 [694] INFO     pulse.unloading_utils: 
LV Volume of inflated geometry = 0.593 ml
2022-06-05 12:00:18,802 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,804 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,869 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,870 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,935 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,936 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:18,995 [694] INFO     pulse.unloading_utils: 
LV Volume of new reference geometry = 0.750 ml
2022-06-05 12:00:19,019 [694] INFO     pulse.unloader: 
Residual:	3.931304295904103e-05
2022-06-05 12:00:19,022 [694] INFO     pulse.unloader: ########################################################################
Unloading suceeding
# Get the unloaded geometry
unloaded_geometry = unloader.unloaded_geometry
2022-06-05 12:00:19,283 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:19,285 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:19,354 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:19,355 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:19,422 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
2022-06-05 12:00:19,423 [694] WARNING  py.warnings: /venv/lib/python3.10/site-packages/ffc/jitcompiler.py:234: QuadratureRepresentationDeprecationWarning:


*** ===================================================== ***
*** FFC: quadrature representation is deprecated! It will ***
*** likely be removed in 2018.2.0 release. Use uflacs     ***
*** representation instead.                               ***
*** ===================================================== ***
fig = plot(geometry.mesh, opacity=0.0, show=False)
fig.add_plot(plot(unloaded_geometry.mesh, color="red", show=False))
fig.show()